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A

ACL - Class in org.labkey.remoteapi.security
 
ACL() - Constructor for class org.labkey.remoteapi.security.ACL
 
addCookie(String, String, String, String, Date, boolean) - Method in class org.labkey.remoteapi.Connection
 
addFilter(Filter) - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Adds a new filter to the list.
addFilter(String, Object, Filter.Operator) - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Constructs and adds a new filter to the list.
addFilter(String, String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsCommand
 
addFilter(String, String, String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsCommand
 
AddGroupMembersCommand - Class in org.labkey.remoteapi.security
Adds a set of principals to a security group.
AddGroupMembersCommand(int) - Constructor for class org.labkey.remoteapi.security.AddGroupMembersCommand
 
addPrincipalId(int...) - Method in class org.labkey.remoteapi.security.GroupMembersCommand
 
addPrincipalId(List<Integer>) - Method in class org.labkey.remoteapi.security.GroupMembersCommand
 
addRow(Map<String, Object>) - Method in class org.labkey.remoteapi.query.SaveRowsCommand
Adds a row to the list of rows to be sent to the server.
addRow(SASRow) - Method in class org.labkey.remoteapi.sas.SASSaveRowsCommand
 
addSort(Sort) - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Adds a new sort definition to the current list.
addSort(String, Sort.Direction) - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Constructs and adds a new sort definition to the current list.
afterExecute() - Method in class org.labkey.remoteapi.Connection
 
allowsMissingValues(String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
ApiKeyCredentialsProvider - Class in org.labkey.remoteapi
Created by adam on 4/15/2016.
ApiKeyCredentialsProvider(String) - Constructor for class org.labkey.remoteapi.ApiKeyCredentialsProvider
 
ApiVersionException - Exception in org.labkey.remoteapi
User: adam Date: Feb 23, 2009 Time: 1:13:26 PM
AssayListCommand - Class in org.labkey.remoteapi.assay
Command for obtaining information about the current assay definitions in a particular folder.
AssayListCommand() - Constructor for class org.labkey.remoteapi.assay.AssayListCommand
Constructs a new AssayListCommand object.
AssayListCommand(AssayListCommand) - Constructor for class org.labkey.remoteapi.assay.AssayListCommand
Constructs a new AssayListCommand which is a copy of the source command
AssayListResponse - Class in org.labkey.remoteapi.assay
Response class for the AssayListCommand.
AssayListResponse(String, int, String, JSONObject, AssayListCommand) - Constructor for class org.labkey.remoteapi.assay.AssayListResponse
Constructs a new AssayListResponse
assayTest(Connection, String) - Static method in class org.labkey.remoteapi.test.Test
 

B

BaseQueryCommand<ResponseType extends CommandResponse> - Class in org.labkey.remoteapi.query
User: brittp Date: Jun 24, 2009 Time: 10:11:39 PM
BaseQueryCommand(BaseQueryCommand<ResponseType>) - Constructor for class org.labkey.remoteapi.query.BaseQueryCommand
 
BaseQueryCommand(String, String) - Constructor for class org.labkey.remoteapi.query.BaseQueryCommand
 
BaseSelect - Interface in org.labkey.remoteapi.query
User: adam Date: Feb 27, 2009 Time: 11:06:20 AM
BaseTransformCommand<ResponseType extends CommandResponse> - Class in org.labkey.remoteapi.di
User: tgaluhn Date: 10/29/13
BaseTransformCommand(BaseTransformCommand) - Constructor for class org.labkey.remoteapi.di.BaseTransformCommand
 
BaseTransformCommand(String, String) - Constructor for class org.labkey.remoteapi.di.BaseTransformCommand
 
BaseTransformResponse - Class in org.labkey.remoteapi.di
User: dax Date: 11/5/13
BaseTransformResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.di.BaseTransformResponse
Constructs a new CommandResponse, initialized with the provided response text and status code.
BasicAuthCredentialsProvider - Class in org.labkey.remoteapi
Created by adam on 4/15/2016.
BasicAuthCredentialsProvider(String, String) - Constructor for class org.labkey.remoteapi.BasicAuthCredentialsProvider
 
Batch - Class in org.labkey.remoteapi.assay
User: jeckels Date: Apr 28, 2010
Batch() - Constructor for class org.labkey.remoteapi.assay.Batch
 
Batch(JSONObject) - Constructor for class org.labkey.remoteapi.assay.Batch
 
beforeExecute(HttpRequest) - Method in class org.labkey.remoteapi.Connection
 
build() - Method in class org.labkey.remoteapi.experiment.LineageCommand.Builder
 
Builder(String) - Constructor for class org.labkey.remoteapi.experiment.LineageCommand.Builder
 
Builder(Integer) - Constructor for class org.labkey.remoteapi.experiment.LineageCommand.Builder
 
Builder(String, Integer) - Constructor for class org.labkey.remoteapi.experiment.LineageCommand.Builder
 

C

CaseInsensitiveHashMap<V> - Class in org.labkey.remoteapi.collections
 
CaseInsensitiveHashMap() - Constructor for class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
CaseInsensitiveHashMap(Map<String, V>) - Constructor for class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
CaseInsensitiveHashMap(int) - Constructor for class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
CheckForStudyReloadCommand - Class in org.labkey.remoteapi.study
Pings an existing LabKey study to check to see if it needs to be reloaded from a study archive on disk.
CheckForStudyReloadCommand() - Constructor for class org.labkey.remoteapi.study.CheckForStudyReloadCommand
 
CheckForStudyReloadCommand(boolean) - Constructor for class org.labkey.remoteapi.study.CheckForStudyReloadCommand
 
CheckForStudyReloadCommand(boolean, boolean) - Constructor for class org.labkey.remoteapi.study.CheckForStudyReloadCommand
 
checkThrowError(Command.Response) - Method in class org.labkey.remoteapi.Command
 
clear() - Method in class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
clearPrincipalIds() - Method in class org.labkey.remoteapi.security.GroupMembersCommand
 
clientBuilder() - Method in class org.labkey.remoteapi.Connection
Create the HttpClientBuilder based on this Connection's configuration options.
ClientConfig - Class in org.labkey.remoteapi.test
Utility class to parse a .properties file and produce reasonable exceptions if required properties aren't present.
ClientConfig(String[]) - Constructor for class org.labkey.remoteapi.test.ClientConfig
Defaults to looking in the working directory for a config.properties file.
close() - Method in class org.labkey.remoteapi.Command.Response
 
Command<ResponseType extends CommandResponse> - Class in org.labkey.remoteapi
Base class for all API commands.
Command(String, String) - Constructor for class org.labkey.remoteapi.Command
Constructs a new Command object for calling the specified API action on the specified controller.
Command(Command<ResponseType>) - Constructor for class org.labkey.remoteapi.Command
Constructs a new Command from an existing command
Command.CommonParameters - Enum in org.labkey.remoteapi
An enum of common parameter names used in API URLs.
Command.Response - Class in org.labkey.remoteapi
Response class allows clients to get an InputStream, consume lazily, and close the connection when complete.
CommandException - Exception in org.labkey.remoteapi
Represents an exception that occurs while executing a command.
CommandException(String) - Constructor for exception org.labkey.remoteapi.CommandException
Constructs a new CommandException given a message only.
CommandException(String, int, Map<String, Object>, String) - Constructor for exception org.labkey.remoteapi.CommandException
CommandException(String, int, Map<String, Object>, String, String) - Constructor for exception org.labkey.remoteapi.CommandException
Constructs a new CommandException given a message, HTTP status code, exception property map, responseText, and contentType.
CommandResponse - Class in org.labkey.remoteapi
Represents the details of a response returned from the LabKey Server.
CommandResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.CommandResponse
Constructs a new CommandResponse, initialized with the provided response text and status code.
CONFIG_ARG_PREFIX - Static variable in class org.labkey.remoteapi.test.ClientConfig
 
configureRequest(String, HttpUriRequest, HttpClientContext) - Method in class org.labkey.remoteapi.ApiKeyCredentialsProvider
 
configureRequest(String, HttpUriRequest, HttpClientContext) - Method in class org.labkey.remoteapi.BasicAuthCredentialsProvider
 
configureRequest(String, HttpUriRequest, HttpClientContext) - Method in interface org.labkey.remoteapi.CredentialsProvider
 
configureRequest(String, HttpUriRequest, HttpClientContext) - Method in class org.labkey.remoteapi.GuestCredentialsProvider
 
configureRequest(String, HttpUriRequest, HttpClientContext) - Method in class org.labkey.remoteapi.NetrcCredentialsProvider
 
Connection - Class in org.labkey.remoteapi
Represents connection information for a particular LabKey Server.
Connection(String, CredentialsProvider) - Constructor for class org.labkey.remoteapi.Connection
Constructs a new Connection object given a base URL and a credentials provider.
Connection(String) - Constructor for class org.labkey.remoteapi.Connection
Constructs a new Connection object with a base URL that attempts authentication via .netrc/_netrc entry, if present.
Connection(String, String, String) - Constructor for class org.labkey.remoteapi.Connection
Constructs a new Connection object for a base URL that attempts basic authentication.
ContainerFilter - Enum in org.labkey.remoteapi.query
Represents a container filter that can be used with the ExecuteSqlCommand and the SelectRowsCommand.
containsKey(Object) - Method in class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
containsKey(String) - Method in class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
CONTENT_TYPE_JSON - Static variable in class org.labkey.remoteapi.Command
A constant for the official JSON content type ("application/json")
copy() - Method in class org.labkey.remoteapi.assay.AssayListCommand
 
copy() - Method in class org.labkey.remoteapi.assay.ImportRunCommand
 
copy() - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
copy() - Method in class org.labkey.remoteapi.assay.SaveAssayBatchCommand
 
copy() - Method in class org.labkey.remoteapi.Command
Returns a copy of this object.
copy() - Method in class org.labkey.remoteapi.experiment.LineageCommand
 
copy() - Method in class org.labkey.remoteapi.PostCommand
 
copy() - Method in class org.labkey.remoteapi.query.DeleteRowsCommand
 
copy() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
 
copy() - Method in class org.labkey.remoteapi.query.GetQueriesCommand
 
copy() - Method in class org.labkey.remoteapi.query.GetQueryDetailsCommand
 
copy() - Method in class org.labkey.remoteapi.query.GetSchemasCommand
 
copy() - Method in class org.labkey.remoteapi.query.ImportDataCommand
 
copy() - Method in class org.labkey.remoteapi.query.InsertRowsCommand
 
copy() - Method in class org.labkey.remoteapi.query.SaveRowsCommand
 
copy() - Method in class org.labkey.remoteapi.query.SelectRowsCommand
 
copy() - Method in class org.labkey.remoteapi.query.UpdateRowsCommand
 
copy() - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
copy() - Method in class org.labkey.remoteapi.security.CreateGroupCommand
 
copy() - Method in class org.labkey.remoteapi.security.CreateUserCommand
 
copy() - Method in class org.labkey.remoteapi.security.DeleteContainerCommand
 
copy() - Method in class org.labkey.remoteapi.security.DeleteGroupCommand
 
copy() - Method in class org.labkey.remoteapi.security.DeleteUserCommand
 
copy() - Method in class org.labkey.remoteapi.security.GetContainersCommand
 
copy() - Method in class org.labkey.remoteapi.security.GetGroupPermsCommand
 
copy() - Method in class org.labkey.remoteapi.security.GetUsersCommand
 
copy() - Method in class org.labkey.remoteapi.security.RenameGroupCommand
 
createConnection() - Method in class org.labkey.remoteapi.test.ClientConfig
Creates a connection object based on the baseServerURL, username, and password config properties.
CreateContainerCommand - Class in org.labkey.remoteapi.security
Create a container (project/folder/workbook) on the server User: jeckels Date: Jul 20, 2012
CreateContainerCommand(CreateContainerCommand) - Constructor for class org.labkey.remoteapi.security.CreateContainerCommand
 
CreateContainerCommand(String) - Constructor for class org.labkey.remoteapi.security.CreateContainerCommand
 
CreateContainerResponse - Class in org.labkey.remoteapi.security
User: jeckels Date: Jul 20, 2012
CreateContainerResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.security.CreateContainerResponse
 
CreateGroupCommand - Class in org.labkey.remoteapi.security
Creates a new user group.
CreateGroupCommand(String) - Constructor for class org.labkey.remoteapi.security.CreateGroupCommand
 
CreateGroupCommand(CreateGroupCommand) - Constructor for class org.labkey.remoteapi.security.CreateGroupCommand
 
CreateGroupResponse - Class in org.labkey.remoteapi.security
 
CreateGroupResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.security.CreateGroupResponse
 
createRequest(URI) - Method in class org.labkey.remoteapi.assay.ImportRunCommand
 
createRequest(URI) - Method in class org.labkey.remoteapi.Command
Creates the appropriate HttpUriRequest instance.
createRequest(URI) - Method in class org.labkey.remoteapi.ms2.StartSearchCommand
 
createRequest(URI) - Method in class org.labkey.remoteapi.PostCommand
Overrides Command.createRequest(URI) to create an HttpPost object.
createRequest(URI) - Method in class org.labkey.remoteapi.query.ImportDataCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.assay.AssayListCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.assay.ImportRunCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.assay.SaveAssayBatchCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.Command
Creates an instance of the response class, initialized with the response text, the HTTP status code, and parsed JSONObject.
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.di.ResetTransformStateCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.di.RunTransformCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.di.UpdateTransformConfigurationCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.experiment.LineageCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.ms2.StartSearchCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.pipeline.FileNotificationCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.query.GetQueriesCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.query.GetQueryDetailsCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.query.GetSchemasCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.query.ImportDataCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.query.SaveRowsCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.query.SelectRowsCommand
Overridden to create a SelectRowsResponse object.
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.security.CreateGroupCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.security.CreateUserCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.security.DeleteContainerCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.security.GetContainersCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.security.GetGroupPermsCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.security.GetUsersCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.security.RenameGroupCommand
 
createResponse(String, int, String, JSONObject) - Method in class org.labkey.remoteapi.study.UpdateParticipantGroupCommand
 
CreateUserCommand - Class in org.labkey.remoteapi.security
Create a new user account on the server.
CreateUserCommand(String) - Constructor for class org.labkey.remoteapi.security.CreateUserCommand
 
CreateUserCommand(CreateUserCommand) - Constructor for class org.labkey.remoteapi.security.CreateUserCommand
 
CreateUserResponse - Class in org.labkey.remoteapi.security
 
CreateUserResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.security.CreateUserResponse
 
CredentialsProvider - Interface in org.labkey.remoteapi
Created by adam on 4/15/2016.
crudTest(Connection, String) - Static method in class org.labkey.remoteapi.test.Test
 

D

Data - Class in org.labkey.remoteapi.assay
Represents a data file that may be used in a run.
Data() - Constructor for class org.labkey.remoteapi.assay.Data
 
Data(JSONObject) - Constructor for class org.labkey.remoteapi.assay.Data
 
datasetTest(Connection, String) - Static method in class org.labkey.remoteapi.test.Test
 
DateParser - Class in org.labkey.remoteapi.query
User: matthewb Date: 2012-03-12 Time: 10:55 AM not static because SimpleDatFormat is not thread-safe
DateParser() - Constructor for class org.labkey.remoteapi.query.DateParser
 
DeleteContainerCommand - Class in org.labkey.remoteapi.security
Delete a container (project/folder/workbook) and all of its children.
DeleteContainerCommand() - Constructor for class org.labkey.remoteapi.security.DeleteContainerCommand
 
DeleteContainerCommand(DeleteContainerCommand) - Constructor for class org.labkey.remoteapi.security.DeleteContainerCommand
 
DeleteContainerResponse - Class in org.labkey.remoteapi.security
Response from a DeleteContainerResponse.
DeleteContainerResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.security.DeleteContainerResponse
 
DeleteGroupCommand - Class in org.labkey.remoteapi.security
Deletes the existing group corresponding to the group id.
DeleteGroupCommand(int) - Constructor for class org.labkey.remoteapi.security.DeleteGroupCommand
 
DeleteGroupCommand(DeleteGroupCommand) - Constructor for class org.labkey.remoteapi.security.DeleteGroupCommand
 
DeleteRowsCommand - Class in org.labkey.remoteapi.query
Command for deleting rows from a read-write schema.
DeleteRowsCommand(String, String) - Constructor for class org.labkey.remoteapi.query.DeleteRowsCommand
Constructs a DeleteRowsCommand for the given schemaName and queryName.
DeleteRowsCommand(DeleteRowsCommand) - Constructor for class org.labkey.remoteapi.query.DeleteRowsCommand
 
DeleteUserCommand - Class in org.labkey.remoteapi.security
Deletes existing users based on userIds If it executed without exception, the users have been deleted
DeleteUserCommand(int) - Constructor for class org.labkey.remoteapi.security.DeleteUserCommand
 
DeleteUserCommand(DeleteUserCommand) - Constructor for class org.labkey.remoteapi.security.DeleteUserCommand
 
Demo - Class in org.labkey.remoteapi.test
 
Demo(String[]) - Constructor for class org.labkey.remoteapi.test.Demo
 
doDemo() - Method in class org.labkey.remoteapi.test.Demo
 
dump() - Method in class org.labkey.remoteapi.experiment.LineageResponse
 

E

ensureAuthenticated() - Method in class org.labkey.remoteapi.Connection
Ensures that the credentials have been used to authenticate the users and returns a client that can be used for other requests
EnsureLoginCommand - Class in org.labkey.remoteapi.security
Simply ensures that the connection is associated with an authenticated user.
EnsureLoginCommand() - Constructor for class org.labkey.remoteapi.security.EnsureLoginCommand
 
execSqlTest(Connection, String) - Static method in class org.labkey.remoteapi.test.Test
 
execute(Connection, String) - Method in class org.labkey.remoteapi.Command
Executes the command in the given folder on the specified connection, and returns information about the response.
execute(Connection, String) - Method in interface org.labkey.remoteapi.query.BaseSelect
 
execute(SASConnection, String) - Method in class org.labkey.remoteapi.sas.SASBaseSelectCommand
 
ExecuteSqlCommand - Class in org.labkey.remoteapi.query
Command for executing arbitrary LabKey SQL.
ExecuteSqlCommand(String) - Constructor for class org.labkey.remoteapi.query.ExecuteSqlCommand
Constructs an ExecuteSqlCommand, initialized with a schema name.
ExecuteSqlCommand(ExecuteSqlCommand) - Constructor for class org.labkey.remoteapi.query.ExecuteSqlCommand
 
ExecuteSqlCommand(String, String) - Constructor for class org.labkey.remoteapi.query.ExecuteSqlCommand
Constructs an ExecuteSqlCommand, initialized with a schema name and SQL query.
executeSqlDemo() - Method in class org.labkey.remoteapi.test.Demo
 
ExpObject - Class in org.labkey.remoteapi.assay
Base class for experiment objects, including Run, Data, Batch, etc User: jeckels Date: Apr 28, 2010
ExpObject() - Constructor for class org.labkey.remoteapi.assay.ExpObject
 
ExpObject(JSONObject) - Constructor for class org.labkey.remoteapi.assay.ExpObject
 

F

FileNotificationCommand - Class in org.labkey.remoteapi.pipeline
Notifies the server that files may have become available for the pipeline to process.
FileNotificationCommand() - Constructor for class org.labkey.remoteapi.pipeline.FileNotificationCommand
 
FileNotificationResponse - Class in org.labkey.remoteapi.pipeline
Server response from FileNotificationCommand.
FileNotificationResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.pipeline.FileNotificationResponse
 
Filter - Class in org.labkey.remoteapi.query
Represents a filter definition for a query
Filter(String, Object) - Constructor for class org.labkey.remoteapi.query.Filter
Constructs a new equality Filter for the given column name and value.
Filter(String, Object, Filter.Operator) - Constructor for class org.labkey.remoteapi.query.Filter
Constructs a filter with a given column name, value and operator.
Filter(Filter) - Constructor for class org.labkey.remoteapi.query.Filter
 
Filter.Operator - Enum in org.labkey.remoteapi.query
 
findContainer(String, Map<String, Object>) - Method in class org.labkey.remoteapi.security.GetContainersResponse
 
findContainer(String[], int, Map<String, Object>) - Method in class org.labkey.remoteapi.security.GetContainersResponse
 
findObject(List<Map<String, Object>>, String, String) - Method in class org.labkey.remoteapi.CommandResponse
Finds, in a List of Maps, the first Map containing an entry that matches propertyName and value matches the value supplied.

G

get(Object) - Method in class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
get(String) - Method in class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
getAbsolutePath() - Method in class org.labkey.remoteapi.assay.Data
 
getActionName() - Method in class org.labkey.remoteapi.Command
Returns the action name specified when constructing this object.
getActionUrl(Connection, String) - Method in class org.labkey.remoteapi.Command
Returns the portion of the URL before the query string for this command.
getAllProperties() - Method in class org.labkey.remoteapi.ResponseObject
 
getAssayDescription() - Method in class org.labkey.remoteapi.assay.nab.NAbRunsResponse
 
getAssayId() - Method in class org.labkey.remoteapi.assay.ImportRunResponse
 
getAssayId() - Method in class org.labkey.remoteapi.assay.nab.NAbRunsResponse
 
getAssayId() - Method in class org.labkey.remoteapi.assay.SaveAssayBatchResponse
 
getAssayName() - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
getAssayName() - Method in class org.labkey.remoteapi.assay.nab.NAbRunsResponse
 
getAsymmetry() - Method in class org.labkey.remoteapi.assay.nab.model.NAbCurveParameters
 
getAverageNeutralization(Connection, String, String, int) - Static method in class org.labkey.remoteapi.test.Test
 
getBaseUrl() - Method in class org.labkey.remoteapi.Connection
Returns the base URL for this connection.
getBatch() - Method in class org.labkey.remoteapi.assay.SaveAssayBatchResponse
 
getBatchId() - Method in class org.labkey.remoteapi.assay.ImportRunResponse
 
getBoolean(String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
getCaption() - Method in enum org.labkey.remoteapi.query.Filter.Operator
Deprecated.
getCaption() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
getCellControl() - Method in class org.labkey.remoteapi.assay.nab.model.NAbRun
 
getCharacter(String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
getChildren() - Method in class org.labkey.remoteapi.experiment.LineageNode
 
getColumn() - Method in class org.labkey.remoteapi.assay.nab.model.NAbWell
 
getColumnCount() - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
getColumnDataType(String) - Method in class org.labkey.remoteapi.query.SelectRowsResponse
Returns the data type for the requested column name.
getColumnModel() - Method in class org.labkey.remoteapi.query.SelectRowsResponse
Returns the column model section of the response.
getColumnModel(String) - Method in class org.labkey.remoteapi.query.SelectRowsResponse
Returns the column properties for the specified column name.
getColumnName() - Method in class org.labkey.remoteapi.query.Filter
 
getColumnName() - Method in class org.labkey.remoteapi.query.Sort
 
getColumnName(double) - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
getColumnNames(String) - Method in class org.labkey.remoteapi.query.GetQueriesResponse
Returns the list of column names available in the given query name.
getColumns() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse
Returns the columns available in the given query name.
getColumns() - Method in class org.labkey.remoteapi.query.SelectRowsCommand
Returns the explicit column list to be requested, or null if the default set of columns will be requested.
getCommand() - Method in class org.labkey.remoteapi.query.SaveRowsResponse
Returns the 'command' response property.
getComment() - Method in class org.labkey.remoteapi.assay.Run
 
getContainerFilter() - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Returns the container filter set for this command
getContainerFilter() - Method in interface org.labkey.remoteapi.query.BaseSelect
 
getContainerFilter() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Returns the container filter set for this command
getContainerId() - Method in class org.labkey.remoteapi.assay.nab.model.NAbRun
 
getContainerId() - Method in class org.labkey.remoteapi.security.GetContainersResponse
 
getContainerPath() - Method in class org.labkey.remoteapi.assay.nab.model.NAbRun
 
getContainerPath() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Lookup
 
getContainerPath() - Method in class org.labkey.remoteapi.security.GetUsersResponse
 
GetContainersCommand - Class in org.labkey.remoteapi.security
 
GetContainersCommand() - Constructor for class org.labkey.remoteapi.security.GetContainersCommand
 
GetContainersCommand(GetContainersCommand) - Constructor for class org.labkey.remoteapi.security.GetContainersCommand
 
GetContainersResponse - Class in org.labkey.remoteapi.security
 
GetContainersResponse(String, int, String, JSONObject, GetContainersCommand) - Constructor for class org.labkey.remoteapi.security.GetContainersResponse
 
getContentLength() - Method in class org.labkey.remoteapi.Command.Response
 
getContentType() - Method in class org.labkey.remoteapi.Command.Response
 
getContentType() - Method in exception org.labkey.remoteapi.CommandException
 
getContentType() - Method in class org.labkey.remoteapi.CommandResponse
Returns the Content-Type header value from the response.
getControllerName() - Method in class org.labkey.remoteapi.Command
Returns the controller name specified when constructing this object.
getCpasType() - Method in class org.labkey.remoteapi.experiment.LineageNode
 
getCurveBasedDilution() - Method in class org.labkey.remoteapi.assay.nab.model.NAbNeutralizationResult
 
getCutoff() - Method in class org.labkey.remoteapi.assay.nab.model.NAbNeutralizationResult
 
getCutoffs() - Method in class org.labkey.remoteapi.assay.nab.model.NAbRun
 
getDataFileURL() - Method in class org.labkey.remoteapi.assay.Data
 
getDataInputs() - Method in class org.labkey.remoteapi.assay.Run
 
getDataOutputs() - Method in class org.labkey.remoteapi.assay.Run
 
getDate(String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
getDefinition(String) - Method in class org.labkey.remoteapi.assay.AssayListResponse
Returns an assay definition for the assay identified by the specified name.
getDefinition(int) - Method in class org.labkey.remoteapi.assay.AssayListResponse
Returns an assay definition for the assay identified by the specified id.
getDefinitions() - Method in class org.labkey.remoteapi.assay.AssayListResponse
Returns the definitions section of the response.
getDeleteParticipantIds() - Method in class org.labkey.remoteapi.study.UpdateParticipantGroupCommand.UpdatedParticipantGroup
 
getDescription() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
getDescription() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse
Returns the description of the query described by this response
getDescription() - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
getDescription() - Method in class org.labkey.remoteapi.study.ParticipantGroup
 
getDescriptionId() - Method in class org.labkey.remoteapi.di.UpdateTransformConfigurationResponse
 
getDilution() - Method in class org.labkey.remoteapi.assay.nab.model.NAbReplicate
 
getDirection() - Method in class org.labkey.remoteapi.query.Sort
 
getDisplayColumn() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Lookup
 
getDisplayName() - Method in class org.labkey.remoteapi.security.GetUsersResponse.UserInfo
 
getDisplayValue() - Method in enum org.labkey.remoteapi.query.Filter.Operator
 
getDisplayValue(String) - Method in interface org.labkey.remoteapi.query.Row
Returns a column's display value (if different from value).
getDisplayValue(String) - Method in class org.labkey.remoteapi.query.RowMap
 
getEmail() - Method in class org.labkey.remoteapi.security.CreateUserCommand
 
getEmail() - Method in class org.labkey.remoteapi.security.CreateUserResponse
 
getEmail() - Method in class org.labkey.remoteapi.security.GetUsersResponse.UserInfo
 
getEnabled() - Method in class org.labkey.remoteapi.di.UpdateTransformConfigurationCommand
 
getEnabled() - Method in class org.labkey.remoteapi.di.UpdateTransformConfigurationResponse
 
getEnsureParticipantIds() - Method in class org.labkey.remoteapi.study.UpdateParticipantGroupCommand.UpdatedParticipantGroup
 
getEntry(String) - Method in class org.labkey.remoteapi.NetrcFileParser
 
getEntry(File, String) - Method in class org.labkey.remoteapi.NetrcFileParser
 
getExtraContext() - Method in class org.labkey.remoteapi.query.SaveRowsCommand
Gets the additional extra context.
getFieldKey() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
getFieldSeparator() - Method in class org.labkey.remoteapi.query.SqlExecuteCommand
 
getFiles() - Method in class org.labkey.remoteapi.ms2.StartSearchCommand
 
getFilters() - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Returns the current list of filters, or null if none are defined.
getFitError() - Method in class org.labkey.remoteapi.assay.nab.model.NAbSample
 
getFitParameters() - Method in class org.labkey.remoteapi.assay.nab.model.NAbSample
 
getFolderType() - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
getGroup() - Method in class org.labkey.remoteapi.security.GetUsersCommand
 
getGroupId() - Method in class org.labkey.remoteapi.security.CreateGroupResponse
 
getGroupId() - Method in class org.labkey.remoteapi.security.DeleteGroupCommand
 
getGroupId() - Method in class org.labkey.remoteapi.security.GetUsersCommand
 
getGroupId() - Method in class org.labkey.remoteapi.security.GroupMembersCommand
 
getGroupId() - Method in class org.labkey.remoteapi.security.RenameGroupCommand
 
GetGroupPermsCommand - Class in org.labkey.remoteapi.security
 
GetGroupPermsCommand() - Constructor for class org.labkey.remoteapi.security.GetGroupPermsCommand
 
GetGroupPermsCommand(GetGroupPermsCommand) - Constructor for class org.labkey.remoteapi.security.GetGroupPermsCommand
 
GetGroupPermsResponse - Class in org.labkey.remoteapi.security
 
GetGroupPermsResponse(String, int, String, JSONObject, GetGroupPermsCommand) - Constructor for class org.labkey.remoteapi.security.GetGroupPermsResponse
 
getHttpClient() - Method in class org.labkey.remoteapi.Connection
Returns the CloseableHttpClient object to use for this connection.
getHttpRequest(Connection, String) - Method in class org.labkey.remoteapi.Command
Returns the appropriate, initialized HttpUriRequest implementation.
getId() - Method in class org.labkey.remoteapi.assay.AssayListCommand
Returns the current assay id filter (if any).
getId() - Method in class org.labkey.remoteapi.assay.ExpObject
 
getId() - Method in class org.labkey.remoteapi.security.CreateContainerResponse
 
getIdColumn() - Method in class org.labkey.remoteapi.query.SelectRowsResponse
Returns the name of the column containing the primary key value for each row.
getInflection() - Method in class org.labkey.remoteapi.assay.nab.model.NAbCurveParameters
 
getInputStream() - Method in class org.labkey.remoteapi.Command.Response
 
getJobId() - Method in class org.labkey.remoteapi.di.RunTransformResponse
 
getJsonObject() - Method in class org.labkey.remoteapi.assay.SaveAssayBatchCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.di.BaseTransformCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.di.UpdateTransformConfigurationCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.PostCommand
Returns the JSON object to post, or null if the JSON object has not yet been set.
getJsonObject() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.query.ImportDataCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.query.SaveRowsCommand
Dynamically builds the JSON object to send based on the current schema name, query name and rows list.
getJsonObject() - Method in class org.labkey.remoteapi.query.SqlExecuteCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.security.CreateGroupCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.security.CreateUserCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.security.DeleteGroupCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.security.DeleteUserCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.security.GroupMembersCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.security.RenameGroupCommand
 
getJsonObject() - Method in class org.labkey.remoteapi.study.UpdateParticipantGroupCommand
 
getKeyColumn() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Lookup
 
getLabel(double) - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
getLabel() - Method in class org.labkey.remoteapi.study.ParticipantGroup
 
getLastChecked() - Method in class org.labkey.remoteapi.di.UpdateTransformConfigurationResponse
 
getLineSeparator() - Method in class org.labkey.remoteapi.query.SqlExecuteCommand
 
getLogin() - Method in class org.labkey.remoteapi.NetrcFileParser.NetrcEntry
 
getLookup() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
getLsid() - Method in class org.labkey.remoteapi.experiment.LineageNode
 
getMachine() - Method in class org.labkey.remoteapi.NetrcFileParser.NetrcEntry
 
getMax() - Method in class org.labkey.remoteapi.assay.nab.model.NAbCurveParameters
 
getMax() - Method in class org.labkey.remoteapi.assay.nab.model.NAbWellGroup
 
getMaxDilution() - Method in class org.labkey.remoteapi.assay.nab.model.NAbSample
 
getMaxRows() - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Returns the current row limit value.
getMaxRows() - Method in interface org.labkey.remoteapi.query.BaseSelect
 
getMaxRows() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Returns the current row limit value.
getMean() - Method in class org.labkey.remoteapi.assay.nab.model.NAbWellGroup
 
getMessage() - Method in class org.labkey.remoteapi.security.CreateUserResponse
 
getMetaData() - Method in class org.labkey.remoteapi.query.SelectRowsResponse
Returns the meta-data section of the response.
getMetaData(String) - Method in class org.labkey.remoteapi.query.SelectRowsResponse
Returns the meta-data for a given column name.
getMin() - Method in class org.labkey.remoteapi.assay.nab.model.NAbCurveParameters
 
getMin() - Method in class org.labkey.remoteapi.assay.nab.model.NAbWellGroup
 
getMinDilution() - Method in class org.labkey.remoteapi.assay.nab.model.NAbSample
 
getMissingValue(String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
getMissingValuesCode() - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
getMvRawValue(String) - Method in interface org.labkey.remoteapi.query.Row
Returns the column's missing-value raw value.
getMvRawValue(String) - Method in class org.labkey.remoteapi.query.RowMap
 
getMvValue(String) - Method in interface org.labkey.remoteapi.query.Row
Returns a column's missing-value indicator.
getMvValue(String) - Method in class org.labkey.remoteapi.query.RowMap
 
getName() - Method in class org.labkey.remoteapi.assay.AssayListCommand
Returns the assay name filter upon (if any)
getName() - Method in class org.labkey.remoteapi.assay.ExpObject
 
getName() - Method in class org.labkey.remoteapi.experiment.LineageNode
 
getName() - Method in enum org.labkey.remoteapi.query.Filter.Operator
Deprecated.
getName() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
getName() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse
Returns the query name that is described by this response
getName() - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
getName() - Method in class org.labkey.remoteapi.security.CreateContainerResponse
 
getName() - Method in class org.labkey.remoteapi.security.CreateGroupCommand
 
getName() - Method in class org.labkey.remoteapi.security.GetUsersCommand
 
getNeutPercent() - Method in class org.labkey.remoteapi.assay.nab.model.NAbReplicate
 
getNeutPlusMinus() - Method in class org.labkey.remoteapi.assay.nab.model.NAbReplicate
 
getNeutralizationResults() - Method in class org.labkey.remoteapi.assay.nab.model.NAbSample
 
getNewName() - Method in class org.labkey.remoteapi.security.RenameGroupCommand
 
getNewName() - Method in class org.labkey.remoteapi.security.RenameGroupResponse
 
getNode() - Method in class org.labkey.remoteapi.experiment.LineageNode.Edge
 
getNodes() - Method in class org.labkey.remoteapi.experiment.LineageResponse
 
getNumeric(String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
getObjectId() - Method in class org.labkey.remoteapi.assay.nab.model.NAbSample
 
getOffset() - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Returns the index of the first row in the resultset to return (defaults to 0).
getOffset() - Method in interface org.labkey.remoteapi.query.BaseSelect
 
getOffset() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Returns the index of the first row in the resultset to return (defaults to 0).
getOldName() - Method in class org.labkey.remoteapi.security.RenameGroupResponse
 
getOperator() - Method in class org.labkey.remoteapi.query.Filter
 
getOperator(String) - Static method in enum org.labkey.remoteapi.query.Filter.Operator
 
getOrDefault(Object, V) - Method in class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
getParameters() - Method in class org.labkey.remoteapi.assay.AssayListCommand
 
getParameters() - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
getParameters() - Method in class org.labkey.remoteapi.Command
Returns the current parameter map, or null if a map has not yet been set.
getParameters() - Method in class org.labkey.remoteapi.experiment.LineageCommand
 
getParameters() - Method in class org.labkey.remoteapi.ms2.StartSearchCommand
 
getParameters() - Method in class org.labkey.remoteapi.query.BaseQueryCommand
 
getParameters() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
 
getParameters() - Method in class org.labkey.remoteapi.query.GetQueriesCommand
 
getParameters() - Method in class org.labkey.remoteapi.query.GetQueryDetailsCommand
 
getParameters() - Method in class org.labkey.remoteapi.query.SelectRowsCommand
 
getParameters() - Method in class org.labkey.remoteapi.security.GetContainersCommand
 
getParameters() - Method in class org.labkey.remoteapi.security.GetGroupPermsCommand
 
getParameters() - Method in class org.labkey.remoteapi.security.GetUsersCommand
 
getParameters() - Method in class org.labkey.remoteapi.study.CheckForStudyReloadCommand
 
getParamValueAsString(Object, String) - Method in class org.labkey.remoteapi.Command
Returns an appropriate string encoding of the parameter value.
getParents() - Method in class org.labkey.remoteapi.experiment.LineageNode
 
getParsedData() - Method in class org.labkey.remoteapi.CommandResponse
Attempts to parse the response text and return a property Map.
getParticipantGroup() - Method in class org.labkey.remoteapi.study.UpdateParticipantGroupResponse
 
getParticipantIds() - Method in class org.labkey.remoteapi.study.ParticipantGroup
 
getPassword() - Method in class org.labkey.remoteapi.NetrcFileParser.NetrcEntry
 
getPath() - Method in class org.labkey.remoteapi.ms2.StartSearchCommand
 
getPath() - Method in class org.labkey.remoteapi.security.CreateContainerResponse
 
getPipelinePath() - Method in class org.labkey.remoteapi.assay.Data
 
getPipelineURL() - Method in class org.labkey.remoteapi.di.RunTransformResponse
 
getPointBasedDilution() - Method in class org.labkey.remoteapi.assay.nab.model.NAbNeutralizationResult
 
getPrincipals() - Method in class org.labkey.remoteapi.security.GroupMembersCommand
 
getProgrammaticName() - Method in enum org.labkey.remoteapi.query.Filter.Operator
 
getProperties() - Method in class org.labkey.remoteapi.assay.ExpObject
 
getProperties() - Method in class org.labkey.remoteapi.assay.nab.model.NAbRun
 
getProperties() - Method in class org.labkey.remoteapi.assay.nab.model.NAbSample
 
getProperties() - Method in exception org.labkey.remoteapi.CommandException
Returns the exception property map, or null if no map was set.
getProperties() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
getProperty(String) - Method in class org.labkey.remoteapi.CommandResponse
Returns the value of a specific property in the parsed data given a path to that property.
getProperty(String[], int, Map<String, Object>) - Method in class org.labkey.remoteapi.CommandResponse
Called by CommandResponse.getProperty(String) after splitting the path into a String[], and recursively by itself as it descends the property hierarchy.
getProperty(String, String) - Method in class org.labkey.remoteapi.test.ClientConfig
 
getProperty(String) - Method in class org.labkey.remoteapi.test.ClientConfig
Gets a property of the given name.
getProtocol() - Method in class org.labkey.remoteapi.ms2.StartSearchCommand
 
GetQueriesCommand - Class in org.labkey.remoteapi.query
Command for obtaining the list of queries available within a given schema.
GetQueriesCommand(String) - Constructor for class org.labkey.remoteapi.query.GetQueriesCommand
Constructs the command given a particular schema name.
GetQueriesCommand(GetQueriesCommand) - Constructor for class org.labkey.remoteapi.query.GetQueriesCommand
 
GetQueriesResponse - Class in org.labkey.remoteapi.query
Represents the response from a GetQueriesCommand.
GetQueriesResponse(String, int, String, JSONObject, GetQueriesCommand) - Constructor for class org.labkey.remoteapi.query.GetQueriesResponse
 
GetQueryDetailsCommand - Class in org.labkey.remoteapi.query
Command for obtaining the list of queries available within a given schema.
GetQueryDetailsCommand(String, String, boolean) - Constructor for class org.labkey.remoteapi.query.GetQueryDetailsCommand
Constructs the command given a particular schema name.
GetQueryDetailsCommand(String, String) - Constructor for class org.labkey.remoteapi.query.GetQueryDetailsCommand
Constructs the command given a particular schema name.
GetQueryDetailsCommand(GetQueryDetailsCommand) - Constructor for class org.labkey.remoteapi.query.GetQueryDetailsCommand
 
GetQueryDetailsResponse - Class in org.labkey.remoteapi.query
Represents the response from a GetQueriesCommand.
GetQueryDetailsResponse(String, int, String, JSONObject, GetQueryDetailsCommand) - Constructor for class org.labkey.remoteapi.query.GetQueryDetailsResponse
 
GetQueryDetailsResponse.Column - Class in org.labkey.remoteapi.query
 
GetQueryDetailsResponse.Lookup - Class in org.labkey.remoteapi.query
 
getQueryName() - Method in class org.labkey.remoteapi.query.GetQueryDetailsCommand
 
getQueryName() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Lookup
 
getQueryName() - Method in class org.labkey.remoteapi.query.ImportDataCommand
Returns the query name
getQueryName() - Method in class org.labkey.remoteapi.query.SaveRowsCommand
Returns the query name
getQueryName() - Method in class org.labkey.remoteapi.query.SaveRowsResponse
Returns the 'queryName' response property.
getQueryName() - Method in class org.labkey.remoteapi.query.SelectRowsCommand
Returns the query this command will request.
getQueryNames() - Method in class org.labkey.remoteapi.query.GetQueriesResponse
Returns the list of available query names in the given schema.
getQueryParameters() - Method in class org.labkey.remoteapi.query.BaseQueryCommand
 
getQueryParameters() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Map of name (string)/value pairs for the values of parameters if the SQL references underlying queries that are parameterized.
getQueryParameters() - Method in class org.labkey.remoteapi.query.SqlExecuteCommand
Map of name (string)/value pairs for the values of parameters if the SQL references underlying queries that are parameterized.
getQueryString() - Method in class org.labkey.remoteapi.Command
Returns the query string portion of the URL for this command.
getQueryStringParamName() - Method in class org.labkey.remoteapi.query.Filter
Returns the query string parameter name for this filter.
getQueryStringParamValue() - Method in class org.labkey.remoteapi.query.Filter
Returns the query string parameter value (not URL-encoded).
getReplicates() - Method in class org.labkey.remoteapi.assay.nab.model.NAbSample
 
getRequiredVersion() - Method in class org.labkey.remoteapi.Command
Returns the required version number of this API call.
getRequiredVersion() - Method in class org.labkey.remoteapi.CommandResponse
Returns the API version number required by the source command.
getRequiredVersion() - Method in interface org.labkey.remoteapi.query.BaseSelect
 
getResponseText() - Method in exception org.labkey.remoteapi.CommandException
Returns the text of the response
getResult() - Method in class org.labkey.remoteapi.di.UpdateTransformConfigurationResponse
 
getRole() - Method in class org.labkey.remoteapi.experiment.LineageNode.Edge
 
getRow() - Method in class org.labkey.remoteapi.assay.nab.model.NAbWell
 
getRow() - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
getRowCount() - Method in class org.labkey.remoteapi.query.ImportDataResponse
 
getRowCount() - Method in class org.labkey.remoteapi.query.SelectRowsResponse
Returns the number of rows this query could return.
getRowId() - Method in class org.labkey.remoteapi.experiment.LineageNode
 
getRowId() - Method in class org.labkey.remoteapi.study.ParticipantGroup
 
getRows() - Method in class org.labkey.remoteapi.query.SaveRowsCommand
Returns the current list of 'rows' (i.e., Maps) that will be sent to the server.
getRowsAffected() - Method in class org.labkey.remoteapi.query.SaveRowsResponse
Returns the 'rowsAffected' response property.
getRowsAffected() - Method in class org.labkey.remoteapi.sas.SASSaveRowsResponse
 
getRowset() - Method in class org.labkey.remoteapi.query.SelectRowsResponse
Returns an iterable Rowset.
getRunId() - Method in class org.labkey.remoteapi.assay.ImportRunResponse
 
getRunId() - Method in class org.labkey.remoteapi.assay.nab.model.NAbRun
 
getRuns() - Method in class org.labkey.remoteapi.assay.Batch
 
getRuns() - Method in class org.labkey.remoteapi.assay.nab.NAbRunsResponse
 
getSamples() - Method in class org.labkey.remoteapi.assay.nab.model.NAbRun
 
getScale(double) - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
getSchemaName() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Returns the current schema name.
getSchemaName() - Method in class org.labkey.remoteapi.query.GetQueriesCommand
 
getSchemaName() - Method in class org.labkey.remoteapi.query.GetQueriesResponse
Returns the schema name the queries in this response belong to.
getSchemaName() - Method in class org.labkey.remoteapi.query.GetQueryDetailsCommand
 
getSchemaName() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse
Returns the schema name the query in this response belongs to.
getSchemaName() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Lookup
 
getSchemaName() - Method in class org.labkey.remoteapi.query.ImportDataCommand
Returns the schema name.
getSchemaName() - Method in class org.labkey.remoteapi.query.SaveRowsCommand
Returns the schema name.
getSchemaName() - Method in class org.labkey.remoteapi.query.SaveRowsResponse
Returns the 'schemaName' response property.
getSchemaName() - Method in class org.labkey.remoteapi.query.SelectRowsCommand
Returns the current schema name this command will query.
getSchemaName() - Method in class org.labkey.remoteapi.query.SqlExecuteCommand
 
getSchemaNames() - Method in class org.labkey.remoteapi.query.GetSchemasResponse
Returns the list of schema names available in the folder path in which this command was executed.
GetSchemasCommand - Class in org.labkey.remoteapi.query
Command to obtain the list of schemas available in a given folder path.
GetSchemasCommand() - Constructor for class org.labkey.remoteapi.query.GetSchemasCommand
 
GetSchemasCommand(GetSchemasCommand) - Constructor for class org.labkey.remoteapi.query.GetSchemasCommand
 
GetSchemasResponse - Class in org.labkey.remoteapi.query
Represents the response of a GetSchemasCommand.
GetSchemasResponse(String, int, String, JSONObject, GetSchemasCommand) - Constructor for class org.labkey.remoteapi.query.GetSchemasResponse
 
getSeed() - Method in class org.labkey.remoteapi.experiment.LineageResponse
 
getSize() - Method in interface org.labkey.remoteapi.query.Rowset
 
getSize() - Method in class org.labkey.remoteapi.query.RowsResponseRowset
 
getSlope() - Method in class org.labkey.remoteapi.assay.nab.model.NAbCurveParameters
 
getSortQueryStringParam(List<Sort>) - Static method in class org.labkey.remoteapi.query.Sort
Constructs the sort query string parameter from the current list of sort definitions.
getSorts() - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Returns the current list of sort definitions.
getSorts() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
A sort specification to apply over the rows returned by the SQL.
getSourceCommand() - Method in class org.labkey.remoteapi.CommandResponse
Returns a reference to a copy of the command that created this response
getSql() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Returns the current SQL query.
getSql() - Method in class org.labkey.remoteapi.query.SqlExecuteCommand
Returns the current SQL query.
getState() - Method in class org.labkey.remoteapi.di.UpdateTransformConfigurationResponse
 
getStatus() - Method in class org.labkey.remoteapi.di.RunTransformResponse
 
getStatusCode() - Method in class org.labkey.remoteapi.Command.Response
 
getStatusCode() - Method in exception org.labkey.remoteapi.CommandException
Returns the HTTP status code returned by the server.
getStatusCode() - Method in class org.labkey.remoteapi.CommandResponse
Returns the HTTP status code (typically 200).
getStatusText() - Method in class org.labkey.remoteapi.Command.Response
 
getStddev() - Method in class org.labkey.remoteapi.assay.nab.model.NAbWellGroup
 
getSuccess() - Method in class org.labkey.remoteapi.di.BaseTransformResponse
 
getSuccess() - Method in class org.labkey.remoteapi.query.ImportDataResponse
 
getSuccessURL() - Method in class org.labkey.remoteapi.assay.ImportRunResponse
 
getText() - Method in class org.labkey.remoteapi.Command.Response
 
getText() - Method in class org.labkey.remoteapi.CommandResponse
Returns the raw response text.
getTimeout() - Method in class org.labkey.remoteapi.Command
Returns the current timeout setting in milliseconds for this Command.
getTimeout() - Method in class org.labkey.remoteapi.Connection
The timeout used for Commands that have not established their own timeouts.
getTitle() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse
Returns the title of the query described by this response (often the same as the name, but not always)
getTitle() - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
getTransformId() - Method in class org.labkey.remoteapi.di.BaseTransformCommand
 
getType() - Method in class org.labkey.remoteapi.assay.AssayListCommand
Returns the current assay type filter (if any).
getType() - Method in class org.labkey.remoteapi.experiment.LineageNode
 
getType() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
getType(String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
getType() - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
getUrl() - Method in class org.labkey.remoteapi.experiment.LineageNode
 
getUrl(String) - Method in interface org.labkey.remoteapi.query.Row
Returns a column's URL
getUrl(String) - Method in class org.labkey.remoteapi.query.RowMap
 
getUrlKey() - Method in enum org.labkey.remoteapi.query.Filter.Operator
 
getUserId() - Method in class org.labkey.remoteapi.security.CreateUserResponse
 
getUserId() - Method in class org.labkey.remoteapi.security.DeleteUserCommand
 
getUserId() - Method in class org.labkey.remoteapi.security.GetUsersResponse.UserInfo
 
getUserPermissions() - Method in class org.labkey.remoteapi.security.GetContainersResponse
 
getUserPermissions(String) - Method in class org.labkey.remoteapi.security.GetContainersResponse
 
GetUsersCommand - Class in org.labkey.remoteapi.security
Returns a list of users given selection criteria.
GetUsersCommand() - Constructor for class org.labkey.remoteapi.security.GetUsersCommand
 
GetUsersCommand(Command, String, int, String) - Constructor for class org.labkey.remoteapi.security.GetUsersCommand
 
getUsersInfo() - Method in class org.labkey.remoteapi.security.GetUsersResponse
 
GetUsersResponse - Class in org.labkey.remoteapi.security
The result of a GetUsersCommand request.
GetUsersResponse(String, int, String, JSONObject, GetUsersCommand) - Constructor for class org.labkey.remoteapi.security.GetUsersResponse
 
GetUsersResponse.UserInfo - Class in org.labkey.remoteapi.security
Information about a single user that matched the request
getValue() - Method in class org.labkey.remoteapi.assay.nab.model.NAbWell
 
getValue() - Method in class org.labkey.remoteapi.query.Filter
 
getValue(String) - Method in interface org.labkey.remoteapi.query.Row
Returns a column's raw value.
getValue(String) - Method in class org.labkey.remoteapi.query.RowMap
 
getVerboseLogging() - Method in class org.labkey.remoteapi.di.UpdateTransformConfigurationCommand
 
getVerboseLogging() - Method in class org.labkey.remoteapi.di.UpdateTransformConfigurationResponse
 
getViewName() - Method in class org.labkey.remoteapi.query.SelectRowsCommand
Returns the current saved view name this command will request.
getVirusControl() - Method in class org.labkey.remoteapi.assay.nab.model.NAbRun
 
getWebPartDemo() - Method in class org.labkey.remoteapi.test.Demo
 
getWellgroupName() - Method in class org.labkey.remoteapi.assay.nab.model.NAbSample
 
getWells() - Method in class org.labkey.remoteapi.assay.nab.model.NAbWellGroup
 
GroupMembersCommand - Class in org.labkey.remoteapi.security
Base class for AddGroupMembersCommand and RemoveGroupMembersCommand
GroupMembersCommand(String, int) - Constructor for class org.labkey.remoteapi.security.GroupMembersCommand
 
GroupMembersCommand(GroupMembersCommand) - Constructor for class org.labkey.remoteapi.security.GroupMembersCommand
 
GuestCredentialsProvider - Class in org.labkey.remoteapi
A credentials provider that provides no credentials.
GuestCredentialsProvider() - Constructor for class org.labkey.remoteapi.GuestCredentialsProvider
 

H

hasPermission(int) - Method in class org.labkey.remoteapi.security.GetContainersResponse
 
hasPermission(int, String) - Method in class org.labkey.remoteapi.security.GetContainersResponse
 

I

ImportDataCommand - Class in org.labkey.remoteapi.query
Import data in bulk from a text, local file, or a file contained within a module on the LabKey Server.
ImportDataCommand(String, String) - Constructor for class org.labkey.remoteapi.query.ImportDataCommand
Constructs an ImportDataCommand for the given schemaName and queryName.
ImportDataCommand(ImportDataCommand) - Constructor for class org.labkey.remoteapi.query.ImportDataCommand
 
ImportDataResponse - Class in org.labkey.remoteapi.query
User: kevink Date: 2/3/17
ImportDataResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.query.ImportDataResponse
 
ImportRunCommand - Class in org.labkey.remoteapi.assay
Import a new assay run.
ImportRunCommand(int) - Constructor for class org.labkey.remoteapi.assay.ImportRunCommand
 
ImportRunCommand(int, File) - Constructor for class org.labkey.remoteapi.assay.ImportRunCommand
 
ImportRunCommand(int, List<Map<String, Object>>) - Constructor for class org.labkey.remoteapi.assay.ImportRunCommand
 
ImportRunDemo - Class in org.labkey.remoteapi.test
User: kevink Date: 9/12/12
ImportRunDemo() - Constructor for class org.labkey.remoteapi.test.ImportRunDemo
 
ImportRunResponse - Class in org.labkey.remoteapi.assay
User: kevink Date: 9/12/12
ImportRunResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.assay.ImportRunResponse
 
includeDeactivated() - Method in class org.labkey.remoteapi.security.GetUsersCommand
 
InsertRowsCommand - Class in org.labkey.remoteapi.query
Command for inserting rows into a table in a read-write schema.
InsertRowsCommand(String, String) - Constructor for class org.labkey.remoteapi.query.InsertRowsCommand
Constructs an InsertRowsCommand for the given schemaName and queryName.
InsertRowsCommand(InsertRowsCommand) - Constructor for class org.labkey.remoteapi.query.InsertRowsCommand
 
isAcceptSelfSignedCerts() - Method in class org.labkey.remoteapi.Connection
Returns true if the connection should accept a self-signed SSL certificate when using HTTPS, false otherwise.
isAutoIncrement() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
isCalculated() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
isCalculateNeut() - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
isDataValueRequired() - Method in enum org.labkey.remoteapi.query.Filter.Operator
 
isExtendedFormat() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Returns whether the extended format will be requested.
isExtendedFormat() - Method in class org.labkey.remoteapi.query.SelectRowsCommand
Returns whether the extended format will be requested.
isHidden() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
isHidden(double) - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
isImportIdentity() - Method in class org.labkey.remoteapi.query.ImportDataCommand
 
isImportLookupByAlternateKey() - Method in class org.labkey.remoteapi.query.ImportDataCommand
 
isIncludeColumns() - Method in class org.labkey.remoteapi.query.GetQueriesCommand
 
isIncludeDetailsColumn() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Include the Details link column in the set of columns (defaults to false).
isIncludeFitParameters() - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
isIncludeStats() - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
isIncludeSubfolders() - Method in class org.labkey.remoteapi.security.GetContainersCommand
 
isIncludeSubfolders() - Method in class org.labkey.remoteapi.security.GetGroupPermsCommand
Returns whether the command will recurse down the subfolders of the folder in which the command is executed.
isIncludeTotalCount() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Include the total number of rows available (defaults to true).
isIncludeUserQueries() - Method in class org.labkey.remoteapi.query.GetQueriesCommand
 
isIncludeWells() - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
isKeyField() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
isMvEnabled() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
isNull(String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
isNullable() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
isPublic() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Lookup
 
isReadOnly() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
isSaveInSession() - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Whether or not the definition of this query should be stored for reuse during the current session.
isSelectable() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
isSendEmail() - Method in class org.labkey.remoteapi.security.CreateUserCommand
 
isUserDefined(String) - Method in class org.labkey.remoteapi.query.GetQueriesResponse
 
isUserEditable() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
isValueRequired() - Method in enum org.labkey.remoteapi.query.Filter.Operator
Deprecated.
isVersionField() - Method in class org.labkey.remoteapi.query.GetQueryDetailsResponse.Column
 
isWorkbook() - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
iterator() - Method in class org.labkey.remoteapi.query.RowsResponseRowset
 

L

LineageCommand - Class in org.labkey.remoteapi.experiment
 
LineageCommand.Builder - Class in org.labkey.remoteapi.experiment
 
LineageNode - Class in org.labkey.remoteapi.experiment
 
LineageNode(String, Map<String, Object>) - Constructor for class org.labkey.remoteapi.experiment.LineageNode
 
LineageNode.Edge - Class in org.labkey.remoteapi.experiment
 
LineageResponse - Class in org.labkey.remoteapi.experiment
 
LineageResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.experiment.LineageResponse
 
Lookup(Map<String, Object>) - Constructor for class org.labkey.remoteapi.query.GetQueryDetailsResponse.Lookup
 

M

main(String[]) - Static method in class org.labkey.remoteapi.experiment.LineageCommand
 
Main - Class in org.labkey.remoteapi.sas
User: adam Date: Dec 20, 2008 Time: 1:06:10 PM
Main() - Constructor for class org.labkey.remoteapi.sas.Main
 
main(String[]) - Static method in class org.labkey.remoteapi.sas.Main
 
main(String[]) - Static method in class org.labkey.remoteapi.test.Demo
 
main(String...) - Static method in class org.labkey.remoteapi.test.ImportRunDemo
 
main(String...) - Static method in class org.labkey.remoteapi.test.MS2SearchClient
 
main(String...) - Static method in class org.labkey.remoteapi.test.PipelineFileAvailableClient
 
main(String...) - Static method in class org.labkey.remoteapi.test.SaveAssayBatchDemo
 
main(String[]) - Static method in class org.labkey.remoteapi.test.Test
 
MS2SearchClient - Class in org.labkey.remoteapi.test
Demo code that accepts one or more CSV files on the command line.
MS2SearchClient() - Constructor for class org.labkey.remoteapi.test.MS2SearchClient
 

N

NAbCurveParameters - Class in org.labkey.remoteapi.assay.nab.model
 
NAbCurveParameters(Map<String, Object>) - Constructor for class org.labkey.remoteapi.assay.nab.model.NAbCurveParameters
 
NAbNeutralizationResult - Class in org.labkey.remoteapi.assay.nab.model
 
NAbNeutralizationResult(long, double, double) - Constructor for class org.labkey.remoteapi.assay.nab.model.NAbNeutralizationResult
 
NAbReplicate - Class in org.labkey.remoteapi.assay.nab.model
 
NAbReplicate(Map<String, Object>) - Constructor for class org.labkey.remoteapi.assay.nab.model.NAbReplicate
 
NAbRun - Class in org.labkey.remoteapi.assay.nab.model
 
NAbRun(Map<String, Object>) - Constructor for class org.labkey.remoteapi.assay.nab.model.NAbRun
 
NAbRunsCommand - Class in org.labkey.remoteapi.assay.nab
Command for obtaining information about the current assay definitions in a particular folder.
NAbRunsCommand() - Constructor for class org.labkey.remoteapi.assay.nab.NAbRunsCommand
Constructs a new AssayListCommand object.
NAbRunsCommand(NAbRunsCommand) - Constructor for class org.labkey.remoteapi.assay.nab.NAbRunsCommand
Constructs a new NAbRunsCommand which is a copy of the source command
NAbRunsResponse - Class in org.labkey.remoteapi.assay.nab
Response class for the NAbRunsCommand.
NAbRunsResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.assay.nab.NAbRunsResponse
Constructs a new CommandResponse, initialized with the provided response text and status code.
NAbSample - Class in org.labkey.remoteapi.assay.nab.model
 
NAbSample(Map<String, Object>, long[]) - Constructor for class org.labkey.remoteapi.assay.nab.model.NAbSample
 
nabTest(Connection, String) - Static method in class org.labkey.remoteapi.test.Test
 
NAbWell - Class in org.labkey.remoteapi.assay.nab.model
 
NAbWell(Map<String, Object>) - Constructor for class org.labkey.remoteapi.assay.nab.model.NAbWell
 
NAbWellGroup - Class in org.labkey.remoteapi.assay.nab.model
 
NAbWellGroup(Map<String, Object>) - Constructor for class org.labkey.remoteapi.assay.nab.model.NAbWellGroup
 
NetrcCredentialsProvider - Class in org.labkey.remoteapi
Attempts to find a .netrc or _netrc file and entry for the given host.
NetrcCredentialsProvider(URI) - Constructor for class org.labkey.remoteapi.NetrcCredentialsProvider
Attempt netrc lookup for the URI's host.
NetrcCredentialsProvider(String) - Constructor for class org.labkey.remoteapi.NetrcCredentialsProvider
Attempt netrc lookup for the given host.
NetrcFileParser - Class in org.labkey.remoteapi
User: adam Date: Jan 10, 2009 Time: 6:30:14 PM
NetrcFileParser() - Constructor for class org.labkey.remoteapi.NetrcFileParser
 
NetrcFileParser.NetrcEntry - Class in org.labkey.remoteapi
 

O

org.labkey.remoteapi - package org.labkey.remoteapi
 
org.labkey.remoteapi.assay - package org.labkey.remoteapi.assay
 
org.labkey.remoteapi.assay.nab - package org.labkey.remoteapi.assay.nab
 
org.labkey.remoteapi.assay.nab.model - package org.labkey.remoteapi.assay.nab.model
 
org.labkey.remoteapi.collections - package org.labkey.remoteapi.collections
 
org.labkey.remoteapi.di - package org.labkey.remoteapi.di
 
org.labkey.remoteapi.experiment - package org.labkey.remoteapi.experiment
 
org.labkey.remoteapi.ms2 - package org.labkey.remoteapi.ms2
 
org.labkey.remoteapi.pipeline - package org.labkey.remoteapi.pipeline
 
org.labkey.remoteapi.query - package org.labkey.remoteapi.query
 
org.labkey.remoteapi.sas - package org.labkey.remoteapi.sas
 
org.labkey.remoteapi.security - package org.labkey.remoteapi.security
 
org.labkey.remoteapi.study - package org.labkey.remoteapi.study
 
org.labkey.remoteapi.test - package org.labkey.remoteapi.test
 

P

parse(String) - Method in class org.labkey.remoteapi.query.DateParser
 
parseJsonType(String) - Static method in enum org.labkey.remoteapi.query.SelectRowsResponse.ColumnDataType
 
ParticipantGroup - Class in org.labkey.remoteapi.study
A client-side representation of a participant group from a study on the server.
ParticipantGroup() - Constructor for class org.labkey.remoteapi.study.ParticipantGroup
 
PERM_ADMIN - Static variable in class org.labkey.remoteapi.security.ACL
 
PERM_ALLOWALL - Static variable in class org.labkey.remoteapi.security.ACL
 
PERM_DELETE - Static variable in class org.labkey.remoteapi.security.ACL
 
PERM_DELETEOWN - Static variable in class org.labkey.remoteapi.security.ACL
 
PERM_INSERT - Static variable in class org.labkey.remoteapi.security.ACL
 
PERM_NONE - Static variable in class org.labkey.remoteapi.security.ACL
 
PERM_READ - Static variable in class org.labkey.remoteapi.security.ACL
 
PERM_READOWN - Static variable in class org.labkey.remoteapi.security.ACL
 
PERM_UPDATE - Static variable in class org.labkey.remoteapi.security.ACL
 
PERM_UPDATEOWN - Static variable in class org.labkey.remoteapi.security.ACL
 
PipelineFileAvailableClient - Class in org.labkey.remoteapi.test
Demo code that notifies server that files may become available under a pipeline root, which releases queued pipeline jobs that are blocked awaiting those files.
PipelineFileAvailableClient() - Constructor for class org.labkey.remoteapi.test.PipelineFileAvailableClient
 
PostCommand<ResponseType extends CommandResponse> - Class in org.labkey.remoteapi
Base class for all commands that needs to post data to the server, rather than providing parameters in the query string.
PostCommand(String, String) - Constructor for class org.labkey.remoteapi.PostCommand
Constructs a new PostCommand given a controller and action name.
PostCommand(PostCommand) - Constructor for class org.labkey.remoteapi.PostCommand
 
put(String, V) - Method in class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
put(String, String) - Method in class org.labkey.remoteapi.sas.SASRow
 
put(String, double) - Method in class org.labkey.remoteapi.sas.SASRow
 
putAll(Map<? extends String, ? extends V>) - Method in class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
putIfAbsent(String, V) - Method in class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 

R

remove(Object) - Method in class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
remove(String) - Method in class org.labkey.remoteapi.collections.CaseInsensitiveHashMap
 
RemoveGroupMembersCommand - Class in org.labkey.remoteapi.security
Removes a set of principals from a security group.
RemoveGroupMembersCommand(int) - Constructor for class org.labkey.remoteapi.security.RemoveGroupMembersCommand
 
RenameGroupCommand - Class in org.labkey.remoteapi.security
Renames an existing group.
RenameGroupCommand(int, String) - Constructor for class org.labkey.remoteapi.security.RenameGroupCommand
 
RenameGroupCommand(RenameGroupCommand) - Constructor for class org.labkey.remoteapi.security.RenameGroupCommand
 
RenameGroupResponse - Class in org.labkey.remoteapi.security
 
RenameGroupResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.security.RenameGroupResponse
 
ResetTransformStateCommand - Class in org.labkey.remoteapi.di
User: tgaluhn Date: 10/29/13
ResetTransformStateCommand(RunTransformCommand) - Constructor for class org.labkey.remoteapi.di.ResetTransformStateCommand
 
ResetTransformStateCommand(String) - Constructor for class org.labkey.remoteapi.di.ResetTransformStateCommand
Reset an ETL transform to its initial state, as if it has never been run
ResetTransformStateResponse - Class in org.labkey.remoteapi.di
User: tgaluhn Date: 10/29/13
ResetTransformStateResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.di.ResetTransformStateResponse
Constructs a new CommandResponse, initialized with the provided response text and status code.
ResponseObject - Class in org.labkey.remoteapi
User: jeckels Date: Apr 3, 2010
ResponseObject(Map<String, Object>) - Constructor for class org.labkey.remoteapi.ResponseObject
 
Row - Interface in org.labkey.remoteapi.query
Provides a format-neutral way of obtaining a row's value.
RowMap - Class in org.labkey.remoteapi.query
 
RowMap() - Constructor for class org.labkey.remoteapi.query.RowMap
 
RowMap(Map<String, Object>) - Constructor for class org.labkey.remoteapi.query.RowMap
 
Rowset - Interface in org.labkey.remoteapi.query
Provides an iterable interface over the response rows that hides the differences between the simple and extended response formats.
RowsResponseRowset - Class in org.labkey.remoteapi.query
 
RowsResponseRowset(List<Map<String, Object>>) - Constructor for class org.labkey.remoteapi.query.RowsResponseRowset
 
Run - Class in org.labkey.remoteapi.assay
Represents a single assay run User: jeckels Date: Apr 28, 2010
Run() - Constructor for class org.labkey.remoteapi.assay.Run
 
Run(JSONObject) - Constructor for class org.labkey.remoteapi.assay.Run
 
RunTransformCommand - Class in org.labkey.remoteapi.di
User: tgaluhn Date: 10/29/13
RunTransformCommand(RunTransformCommand) - Constructor for class org.labkey.remoteapi.di.RunTransformCommand
 
RunTransformCommand(String) - Constructor for class org.labkey.remoteapi.di.RunTransformCommand
 
RunTransformResponse - Class in org.labkey.remoteapi.di
User: tgaluhn Date: 10/29/13
RunTransformResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.di.RunTransformResponse
Constructs a new CommandResponse, initialized with the provided response text and status code.

S

SASBaseSelectCommand - Class in org.labkey.remoteapi.sas
User: adam Date: Feb 23, 2009 Time: 9:37:55 AM
SASBaseSelectCommand(BaseSelect) - Constructor for class org.labkey.remoteapi.sas.SASBaseSelectCommand
 
SASConnection - Class in org.labkey.remoteapi.sas
User: adam Date: Jan 10, 2009 Time: 5:20:32 PM
SASConnection(String, String, String) - Constructor for class org.labkey.remoteapi.sas.SASConnection
 
SASConnection(String) - Constructor for class org.labkey.remoteapi.sas.SASConnection
 
SASConnection(String, String) - Constructor for class org.labkey.remoteapi.sas.SASConnection
 
SASDeleteRowsCommand - Class in org.labkey.remoteapi.sas
User: adam Date: Feb 2, 2009 Time: 2:50:35 PM
SASDeleteRowsCommand(String, String) - Constructor for class org.labkey.remoteapi.sas.SASDeleteRowsCommand
 
SASExecuteSqlCommand - Class in org.labkey.remoteapi.sas
User: adam Date: Jan 13, 2009 Time: 3:52:10 PM
SASExecuteSqlCommand(String, String) - Constructor for class org.labkey.remoteapi.sas.SASExecuteSqlCommand
 
SASInsertRowsCommand - Class in org.labkey.remoteapi.sas
User: adam Date: Feb 2, 2009 Time: 2:50:35 PM
SASInsertRowsCommand(String, String) - Constructor for class org.labkey.remoteapi.sas.SASInsertRowsCommand
 
SASRow - Class in org.labkey.remoteapi.sas
User: adam Date: Feb 2, 2009 Time: 2:54:45 PM
SASRow() - Constructor for class org.labkey.remoteapi.sas.SASRow
 
SASSaveRowsCommand - Class in org.labkey.remoteapi.sas
User: adam Date: Feb 2, 2009 Time: 2:50:35 PM
SASSaveRowsCommand(SaveRowsCommand) - Constructor for class org.labkey.remoteapi.sas.SASSaveRowsCommand
 
SASSaveRowsResponse - Class in org.labkey.remoteapi.sas
User: adam Date: Feb 2, 2009 Time: 3:07:22 PM
SASSaveRowsResponse(SASConnection, SASInsertRowsCommand, String) - Constructor for class org.labkey.remoteapi.sas.SASSaveRowsResponse
 
SASSaveRowsResponse(SASConnection, SASDeleteRowsCommand, String) - Constructor for class org.labkey.remoteapi.sas.SASSaveRowsResponse
 
SASSaveRowsResponse(SASConnection, SASUpdateRowsCommand, String) - Constructor for class org.labkey.remoteapi.sas.SASSaveRowsResponse
 
SASSelectRowsCommand - Class in org.labkey.remoteapi.sas
User: adam Date: Dec 20, 2008 Time: 1:10:52 PM
SASSelectRowsCommand(String, String) - Constructor for class org.labkey.remoteapi.sas.SASSelectRowsCommand
 
SASSelectRowsResponse - Class in org.labkey.remoteapi.sas
User: adam Date: Jan 10, 2009 Time: 11:09:53 PM
SASSelectRowsResponse(SASConnection, SASSelectRowsCommand, String) - Constructor for class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
SASSelectRowsResponse(SASConnection, SASExecuteSqlCommand, String) - Constructor for class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
SASUpdateRowsCommand - Class in org.labkey.remoteapi.sas
User: adam Date: Feb 3, 2009 Time: 7:25:54 PM
SASUpdateRowsCommand(String, String) - Constructor for class org.labkey.remoteapi.sas.SASUpdateRowsCommand
 
SaveAssayBatchCommand - Class in org.labkey.remoteapi.assay
Saves an assay batch on the server.
SaveAssayBatchCommand(int) - Constructor for class org.labkey.remoteapi.assay.SaveAssayBatchCommand
 
SaveAssayBatchCommand(int, Batch) - Constructor for class org.labkey.remoteapi.assay.SaveAssayBatchCommand
 
SaveAssayBatchDemo - Class in org.labkey.remoteapi.test
Five command line args: 1.
SaveAssayBatchDemo() - Constructor for class org.labkey.remoteapi.test.SaveAssayBatchDemo
 
SaveAssayBatchResponse - Class in org.labkey.remoteapi.assay
User: jeckels Date: Apr 28, 2010
SaveAssayBatchResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.assay.SaveAssayBatchResponse
 
SaveRowsCommand - Class in org.labkey.remoteapi.query
Base class for commands that make changes to rows exposed from a given query in a given schema.
SaveRowsCommand(String, String, String) - Constructor for class org.labkey.remoteapi.query.SaveRowsCommand
Constructs a new SaveRowsCommand for a given schema, query and action name.
SaveRowsCommand(SaveRowsCommand) - Constructor for class org.labkey.remoteapi.query.SaveRowsCommand
 
SaveRowsResponse - Class in org.labkey.remoteapi.query
Response object used for commands that derive from SaveRowsCommand.
SaveRowsResponse(String, int, String, JSONObject, SaveRowsCommand) - Constructor for class org.labkey.remoteapi.query.SaveRowsResponse
Constructs a new SaveRowsResponse given the response text and status code
SelectRowsCommand - Class in org.labkey.remoteapi.query
Command for selecting data from any LabKey schema/query exposed on the server identified by the Connection object supplied to the Command.execute(org.labkey.remoteapi.Connection, String) method.
SelectRowsCommand(String, String) - Constructor for class org.labkey.remoteapi.query.SelectRowsCommand
Constructs a new SelectRowsCommand for the given schema and query name.
SelectRowsCommand(SelectRowsCommand) - Constructor for class org.labkey.remoteapi.query.SelectRowsCommand
Constructs a new SelectRowsCommand that is a copy of the source command
SelectRowsResponse - Class in org.labkey.remoteapi.query
The command response class returned from the Command.execute(org.labkey.remoteapi.Connection, String) method.
SelectRowsResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.query.SelectRowsResponse
Constructs a new SelectRowsResponse given the response text and HTTP status code.
SelectRowsResponse.ColumnDataType - Enum in org.labkey.remoteapi.query
An enumeration of the possible column data types
selectTest(Connection, String) - Static method in class org.labkey.remoteapi.test.Test
 
setAbsolutePath(String) - Method in class org.labkey.remoteapi.assay.Data
 
setAcceptSelfSignedCerts(boolean) - Method in class org.labkey.remoteapi.Connection
Sets the accept self-signed certificates option.
setAssayName(String) - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
setBatchId(int) - Method in class org.labkey.remoteapi.assay.ImportRunCommand
 
setBatchProperties(Map<String, Object>) - Method in class org.labkey.remoteapi.assay.ImportRunCommand
 
setCalculateNeut(boolean) - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
setChildren(Boolean) - Method in class org.labkey.remoteapi.experiment.LineageCommand.Builder
 
setColumnName(String) - Method in class org.labkey.remoteapi.query.Filter
 
setColumnName(String) - Method in class org.labkey.remoteapi.query.Sort
 
setColumns(List<String>) - Method in class org.labkey.remoteapi.query.SelectRowsCommand
Sets an explicit list of columns to request.
setColumns(String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsCommand
 
setComment(String) - Method in class org.labkey.remoteapi.assay.ImportRunCommand
 
setComment(String) - Method in class org.labkey.remoteapi.assay.Run
 
setContainerFilter(ContainerFilter) - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Sets the container filter for the sql to be executed.
setContainerFilter(ContainerFilter) - Method in interface org.labkey.remoteapi.query.BaseSelect
 
setContainerFilter(ContainerFilter) - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Sets the container filter for the sql to be executed.
setContainerFilter(String) - Method in class org.labkey.remoteapi.sas.SASBaseSelectCommand
 
setCpasType(String) - Method in class org.labkey.remoteapi.experiment.LineageCommand.Builder
 
setDataFileURL(String) - Method in class org.labkey.remoteapi.assay.Data
 
setDataInputs(List<Data>) - Method in class org.labkey.remoteapi.assay.Run
 
setDataOutputs(List<Data>) - Method in class org.labkey.remoteapi.assay.Run
 
setDeleteParticipantIds(Set<String>) - Method in class org.labkey.remoteapi.study.UpdateParticipantGroupCommand.UpdatedParticipantGroup
 
setDepth(Integer) - Method in class org.labkey.remoteapi.experiment.LineageCommand.Builder
 
setDescription(String) - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
setDescription(String) - Method in class org.labkey.remoteapi.study.ParticipantGroup
 
setDirection(Sort.Direction) - Method in class org.labkey.remoteapi.query.Sort
 
setEmail(String) - Method in class org.labkey.remoteapi.security.CreateUserCommand
Set the email address for the new user.
setEnabled(Boolean) - Method in class org.labkey.remoteapi.di.UpdateTransformConfigurationCommand
 
setEnsureParticipantIds(Set<String>) - Method in class org.labkey.remoteapi.study.UpdateParticipantGroupCommand.UpdatedParticipantGroup
 
setExpType(String) - Method in class org.labkey.remoteapi.experiment.LineageCommand.Builder
 
setExtendedFormat(boolean) - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Set to true to request the extended response format, which includes URLs, Missing-Value indicators and display values in addition to the raw values.
setExtendedFormat(boolean) - Method in class org.labkey.remoteapi.query.SelectRowsCommand
Set to true to request the extended response format, which includes URLs, Missing-Value indicators and display values in addition to the raw values.
setExtraContext(Map<String, Object>) - Method in class org.labkey.remoteapi.query.SaveRowsCommand
Sets the additional extra context.
setFile(File) - Method in class org.labkey.remoteapi.assay.ImportRunCommand
 
setFile(File) - Method in class org.labkey.remoteapi.query.ImportDataCommand
 
setFiles(List<String>) - Method in class org.labkey.remoteapi.ms2.StartSearchCommand
 
setFilters(List<Filter>) - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Sets the current list of filters.
setFolderType(String) - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
setGroup(String) - Method in class org.labkey.remoteapi.security.GetUsersCommand
 
setGroupId(int) - Method in class org.labkey.remoteapi.security.DeleteGroupCommand
 
setGroupId(int) - Method in class org.labkey.remoteapi.security.GetUsersCommand
 
setGroupId(int) - Method in class org.labkey.remoteapi.security.GroupMembersCommand
 
setGroupId(int) - Method in class org.labkey.remoteapi.security.RenameGroupCommand
 
setId(Integer) - Method in class org.labkey.remoteapi.assay.AssayListCommand
Sets the current assay id filter.
setId(int) - Method in class org.labkey.remoteapi.assay.ExpObject
 
setImportIdentity(boolean) - Method in class org.labkey.remoteapi.query.ImportDataCommand
 
setImportLookupByAlternateKey(boolean) - Method in class org.labkey.remoteapi.query.ImportDataCommand
 
setIncludeColumns(boolean) - Method in class org.labkey.remoteapi.query.GetQueriesCommand
Pass false to omit information about the columns within each query.
setIncludeDeactivated(Boolean) - Method in class org.labkey.remoteapi.security.GetUsersCommand
 
setIncludeDetailsColumn(boolean) - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Include the Details link column in the set of columns (defaults to false).
setIncludeFitParameters(boolean) - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
setIncludeStats(boolean) - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
setIncludeSubfolders(boolean) - Method in class org.labkey.remoteapi.security.GetContainersCommand
 
setIncludeSubfolders(boolean) - Method in class org.labkey.remoteapi.security.GetGroupPermsCommand
Sets whether this command should recurse down the subfolders of the folder in which the command is executed.
setIncludeTotalCount(boolean) - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Include the total number of rows available (defaults to true).
setIncludeUserQueries(boolean) - Method in class org.labkey.remoteapi.query.GetQueriesCommand
Pass false to this method to omit user-defined queries from the results.
setIncludeWells(boolean) - Method in class org.labkey.remoteapi.assay.nab.NAbRunsCommand
 
setJsonObject(JSONObject) - Method in class org.labkey.remoteapi.PostCommand
Sets the JSON object to post.
setLabel(String) - Method in class org.labkey.remoteapi.study.ParticipantGroup
 
setMap(Map<String, Object>) - Method in class org.labkey.remoteapi.query.RowMap
 
setMaxRows(int) - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Sets the current row limit value.
setMaxRows(int) - Method in interface org.labkey.remoteapi.query.BaseSelect
 
setMaxRows(int) - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Sets the current row limit value.
setMaxRows(double) - Method in class org.labkey.remoteapi.sas.SASBaseSelectCommand
 
setModuleResource(String, String) - Method in class org.labkey.remoteapi.query.ImportDataCommand
 
setName(String) - Method in class org.labkey.remoteapi.assay.AssayListCommand
Sets the assay name to filter upon.
setName(String) - Method in class org.labkey.remoteapi.assay.ExpObject
 
setName(String) - Method in class org.labkey.remoteapi.assay.ImportRunCommand
 
setName(String) - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
setName(String) - Method in class org.labkey.remoteapi.security.CreateGroupCommand
 
setName(String) - Method in class org.labkey.remoteapi.security.GetUsersCommand
 
setNewName(String) - Method in class org.labkey.remoteapi.security.RenameGroupCommand
 
setOffset(int) - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Sets the index of the first row in the resultset to return from the server.
setOffset(int) - Method in interface org.labkey.remoteapi.query.BaseSelect
 
setOffset(int) - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Sets the index of the first row in the resultset to return from the server.
setOffset(double) - Method in class org.labkey.remoteapi.sas.SASBaseSelectCommand
 
setOperator(Filter.Operator) - Method in class org.labkey.remoteapi.query.Filter
 
setParameters(Map<String, Object>) - Method in class org.labkey.remoteapi.Command
Sets the current parameter map.
setParents(Boolean) - Method in class org.labkey.remoteapi.experiment.LineageCommand.Builder
 
setParticipantIds(Set<String>) - Method in class org.labkey.remoteapi.study.ParticipantGroup
 
setPath(String) - Method in class org.labkey.remoteapi.ms2.StartSearchCommand
 
setPath(String) - Method in class org.labkey.remoteapi.query.ImportDataCommand
 
setPipelinePath(String) - Method in class org.labkey.remoteapi.assay.Data
 
setProperties(Map<String, Object>) - Method in class org.labkey.remoteapi.assay.ExpObject
 
setProperties(Map<String, Object>) - Method in class org.labkey.remoteapi.assay.ImportRunCommand
 
setProtocol(String) - Method in class org.labkey.remoteapi.ms2.StartSearchCommand
 
setProxy(String, Integer) - Method in class org.labkey.remoteapi.Connection
Sets the proxy host and port for this Connection.
setQueryName(String) - Method in class org.labkey.remoteapi.query.GetQueryDetailsCommand
 
setQueryName(String) - Method in class org.labkey.remoteapi.query.SaveRowsCommand
Sets a new query name to update
setQueryName(String) - Method in class org.labkey.remoteapi.query.SelectRowsCommand
Sets the query name this command will request.
setQueryParameters(Map<String, String>) - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Map of name (string)/value pairs for the values of parameters if the SQL references underlying queries that are parameterized.
setQueryParameters(Map<String, String>) - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Map of name (string)/value pairs for the values of parameters if the SQL references underlying queries that are parameterized.
setQueryParameters(Map<String, String>) - Method in class org.labkey.remoteapi.query.SqlExecuteCommand
Map of name (string)/value pairs for the values of parameters if the SQL references underlying queries that are parameterized.
setRequiredVersion(double) - Method in class org.labkey.remoteapi.Command
Sets the required version number for this API call.
setRequiredVersion(double) - Method in interface org.labkey.remoteapi.query.BaseSelect
 
setResultData(List<Map<String, Object>>) - Method in class org.labkey.remoteapi.assay.Run
 
setRowId(Integer) - Method in class org.labkey.remoteapi.study.ParticipantGroup
 
setRows(List<Map<String, Object>>) - Method in class org.labkey.remoteapi.query.SaveRowsCommand
Sets the list of 'rows' (i.e., Maps) to be sent to the server.
setRunFilePath(String) - Method in class org.labkey.remoteapi.assay.ImportRunCommand
Absolute or relative path to assay data file to be imported.
setRuns(List<Run>) - Method in class org.labkey.remoteapi.assay.Batch
 
setSaveInSession(boolean) - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Whether or not the definition of this query should be stored for reuse during the current session.
setSchemaName(String) - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Sets the current schema name.
setSchemaName(String) - Method in class org.labkey.remoteapi.query.GetQueriesCommand
 
setSchemaName(String) - Method in class org.labkey.remoteapi.query.GetQueryDetailsCommand
 
setSchemaName(String) - Method in class org.labkey.remoteapi.query.SaveRowsCommand
Sets the schema name
setSchemaName(String) - Method in class org.labkey.remoteapi.query.SelectRowsCommand
Sets the schema name this command will query.
setSchemaName(String) - Method in class org.labkey.remoteapi.query.SqlExecuteCommand
Sets the current schema name.
setSendEmail(boolean) - Method in class org.labkey.remoteapi.security.CreateUserCommand
Set to true to send email to the user with login instructions, false to skip email.
setSort(List<Sort>) - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
A sort specification to apply over the rows returned by the SQL.
setSorts(List<Sort>) - Method in class org.labkey.remoteapi.query.BaseQueryCommand
Sets the current set of sort definitions.
setSorts(String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsCommand
 
setSql(String) - Method in class org.labkey.remoteapi.query.ExecuteSqlCommand
Sets the SQL query to execute.
setSql(String) - Method in class org.labkey.remoteapi.query.SqlExecuteCommand
Sets the SQL query to execute.
setText(String) - Method in class org.labkey.remoteapi.query.ImportDataCommand
 
setTimeout(Integer) - Method in class org.labkey.remoteapi.Command
Sets the timeout for this Command.
setTimeout(Integer) - Method in class org.labkey.remoteapi.Connection
Set a default timeout for Commands that have not established their own timeouts.
setTitle(String) - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
setTransformId(String) - Method in class org.labkey.remoteapi.di.BaseTransformCommand
 
setType(String) - Method in class org.labkey.remoteapi.assay.AssayListCommand
Sets the assay type filter.
setType(String) - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
setUseJson(boolean) - Method in class org.labkey.remoteapi.assay.ImportRunCommand
 
setUserId(int) - Method in class org.labkey.remoteapi.security.DeleteUserCommand
 
setValue(Object) - Method in class org.labkey.remoteapi.query.Filter
 
setVerboseLogging(Boolean) - Method in class org.labkey.remoteapi.di.UpdateTransformConfigurationCommand
 
setViewName(String) - Method in class org.labkey.remoteapi.query.SelectRowsCommand
Sets a particular saved view to request.
setViewName(String) - Method in class org.labkey.remoteapi.sas.SASSelectRowsCommand
 
setWorkbook(boolean) - Method in class org.labkey.remoteapi.security.CreateContainerCommand
 
simpleSelectDemo() - Method in class org.labkey.remoteapi.test.Demo
 
Sort - Class in org.labkey.remoteapi.query
Represents a particular sort order entry, which consists of a column name and an optional direction
Sort(String) - Constructor for class org.labkey.remoteapi.query.Sort
 
Sort(String, Sort.Direction) - Constructor for class org.labkey.remoteapi.query.Sort
 
Sort(Sort) - Constructor for class org.labkey.remoteapi.query.Sort
 
Sort.Direction - Enum in org.labkey.remoteapi.query
 
sortFilterDemo() - Method in class org.labkey.remoteapi.test.Demo
 
SqlExecuteCommand - Class in org.labkey.remoteapi.query
Command for executing arbitrary LabKey SQL.
SqlExecuteCommand(String) - Constructor for class org.labkey.remoteapi.query.SqlExecuteCommand
Constructs an ExecuteSqlCommand, initialized with a schema name.
SqlExecuteCommand(SqlExecuteCommand) - Constructor for class org.labkey.remoteapi.query.SqlExecuteCommand
 
SqlExecuteCommand(String, String) - Constructor for class org.labkey.remoteapi.query.SqlExecuteCommand
Constructs an ExecuteSqlCommand, initialized with a schema name and SQL query.
StartSearchCommand - Class in org.labkey.remoteapi.ms2
Initiates an MS2 search.
StartSearchCommand(StartSearchCommand.SearchEngine, String, String, List<String>) - Constructor for class org.labkey.remoteapi.ms2.StartSearchCommand
 
StartSearchCommand.SearchEngine - Enum in org.labkey.remoteapi.ms2
The set of supported search engines, which may or may not be available on any given server
StartSearchResponse - Class in org.labkey.remoteapi.ms2
User: jeckels Date: Feb 11, 2011
StartSearchResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.ms2.StartSearchResponse
 

T

Test - Class in org.labkey.remoteapi.test
 
Test() - Constructor for class org.labkey.remoteapi.test.Test
 
testMakeLegal() - Static method in class org.labkey.remoteapi.sas.SASSelectRowsResponse
 
toJSON(Map<String, Object>) - Method in class org.labkey.remoteapi.assay.ExpObject
Temp Fix for Issue: 23708 The Simple JSON library isn't properly serializing Dates, and generates invalid JSON.
toJSONObject() - Method in class org.labkey.remoteapi.assay.Batch
 
toJSONObject() - Method in class org.labkey.remoteapi.assay.Data
 
toJSONObject() - Method in class org.labkey.remoteapi.assay.ExpObject
 
toJSONObject() - Method in class org.labkey.remoteapi.assay.Run
 
toQueryStringParam() - Method in class org.labkey.remoteapi.query.Sort
 
toString() - Method in class org.labkey.remoteapi.query.Filter
 
toString() - Method in class org.labkey.remoteapi.query.RowMap
 

U

UpdatedParticipantGroup() - Constructor for class org.labkey.remoteapi.study.UpdateParticipantGroupCommand.UpdatedParticipantGroup
 
UpdateParticipantGroupCommand - Class in org.labkey.remoteapi.study
Request to be sent to the server to update an existing participant group User: jeckels Date: 12/11/13
UpdateParticipantGroupCommand(ParticipantGroup) - Constructor for class org.labkey.remoteapi.study.UpdateParticipantGroupCommand
 
UpdateParticipantGroupCommand.UpdatedParticipantGroup - Class in org.labkey.remoteapi.study
Special subclass that allows specifying just participants that should be added or removed, without needing to specify the full set of participants.
UpdateParticipantGroupResponse - Class in org.labkey.remoteapi.study
Result of making a request to the server to update an existing participant group User: jeckels Date: 12/11/13
UpdateParticipantGroupResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.study.UpdateParticipantGroupResponse
 
UpdateRowsCommand - Class in org.labkey.remoteapi.query
Command for updating rows into a table in a read-write schema.
UpdateRowsCommand(String, String) - Constructor for class org.labkey.remoteapi.query.UpdateRowsCommand
Constructs an UpdateRowsCommand for the given schemaName and queryName.
UpdateRowsCommand(UpdateRowsCommand) - Constructor for class org.labkey.remoteapi.query.UpdateRowsCommand
 
UpdateTransformConfigurationCommand - Class in org.labkey.remoteapi.di
User: tgaluhn Date: 10/29/13
UpdateTransformConfigurationCommand(UpdateTransformConfigurationCommand) - Constructor for class org.labkey.remoteapi.di.UpdateTransformConfigurationCommand
 
UpdateTransformConfigurationCommand(String) - Constructor for class org.labkey.remoteapi.di.UpdateTransformConfigurationCommand
 
UpdateTransformConfigurationResponse - Class in org.labkey.remoteapi.di
User: tgaluhn Date: 10/29/13
UpdateTransformConfigurationResponse(String, int, String, JSONObject, Command) - Constructor for class org.labkey.remoteapi.di.UpdateTransformConfigurationResponse
Constructs a new CommandResponse, initialized with the provided response text and status code.

V

valueOf(String) - Static method in enum org.labkey.remoteapi.Command.CommonParameters
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.labkey.remoteapi.ms2.StartSearchCommand.SearchEngine
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.labkey.remoteapi.query.ContainerFilter
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.labkey.remoteapi.query.Filter.Operator
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.labkey.remoteapi.query.SelectRowsResponse.ColumnDataType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.labkey.remoteapi.query.Sort.Direction
Returns the enum constant of this type with the specified name.
values() - Static method in enum org.labkey.remoteapi.Command.CommonParameters
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.labkey.remoteapi.ms2.StartSearchCommand.SearchEngine
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.labkey.remoteapi.query.ContainerFilter
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.labkey.remoteapi.query.Filter.Operator
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.labkey.remoteapi.query.SelectRowsResponse.ColumnDataType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.labkey.remoteapi.query.Sort.Direction
Returns an array containing the constants of this enum type, in the order they are declared.

_

_allProperties - Variable in class org.labkey.remoteapi.ResponseObject
 
_command - Variable in class org.labkey.remoteapi.sas.SASBaseSelectCommand
 
_containerFilter - Variable in class org.labkey.remoteapi.query.BaseQueryCommand
 
_execute(Connection, String) - Method in class org.labkey.remoteapi.Command
 
_filters - Variable in class org.labkey.remoteapi.query.BaseQueryCommand
 
_importIdentity - Variable in class org.labkey.remoteapi.query.ImportDataCommand
 
_importLookupByAlternateKey - Variable in class org.labkey.remoteapi.query.ImportDataCommand
 
_maxRows - Variable in class org.labkey.remoteapi.query.BaseQueryCommand
 
_offset - Variable in class org.labkey.remoteapi.query.BaseQueryCommand
 
_sorts - Variable in class org.labkey.remoteapi.query.BaseQueryCommand
 
_transformId - Variable in class org.labkey.remoteapi.di.BaseTransformCommand
 
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